August 19, 2017 by Piyush Tripathi
Gqiime: GUI for open-source bioinformatics pipeline
QIIME (canonically pronounced chime) stands for Quantitative Insights Into Microbial Ecology.
QIIME is an open-source bioinformatics pipeline for performing microbiome analysis from raw DNA sequencing data. QIIME is designed to take users from raw sequencing data generated on the Illumina or other platforms through publication quality graphics and statistics. This includes demultiplexing and quality filtering, OTU picking, taxonomic assignment, and phylogenetic reconstruction, and diversity analyses and visualizations. QIIME has been applied to studies based on billions of sequences from tens of thousands of samples.
initial prototype at :
The Home Page
Creating a Qiime Project
Creating automatic qiime pipeline
Downloading Pipeline Shell file
© GI Lab, Texas A&M University 2014 | Created By : Piyush Tripathi(email@example.com)